Three research federations in complex systems (IXXI), systems biology (BioSyl) and machine learning (Scidolyse) have decided to join their forces to organize a one-day online workshop on AI – Bio on October 1st.

This will be a zoom-based meeting. Please register to receive connection instructions before the meeting starts.

Program

9:00 – 9h45 Jean-Phillipe Vert (France) Google Brain/Mines ParisTech Machine learning for single-cell omics data
9h45 – 10h30 Stefan Bonn (Germany) The Medical Center Hamburg-Eppendorf (UKE) De-noising and deconvolution of omics data using deep learning

10h30 – 11h00 Break

11h00 – 11h45 Laure Blanc-Féraud (France) CNRS Sophia Antipolis Some advances in fluorescence microscopy super-resolution.
11h45 – 12h30 Vera Pancaldi (France) CRCT – Toulouse  Data integration and cellular network approaches to characterise the tumour microenvironment

12h30 – 14h00 Break

14h00 – 14h45 Mathieu Carrière (France) Inria Sophia Antipolis Topology identifies emerging adaptive mutations in SARS-CoV-2
14h45- 15h30 Nelle Varoquaux (France) TIMC – Grenoble Inference of genome 3D architecture by modeling overdispersion of Hi-C data/div>

15h30 – 16h00 Break

16h00 – 16h45 Hugo Lavenant (Italy) Bocconi University – Milan Using optimal transport for trajectory inference
16h45 – 17h30 Patrick Stumpf (Netherland) RWTH Aachen University Illuminating the dynamics of stem cell differentiation and ageing

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